miRBase entry: ppy-mir-1908

Stem-loop ppy-mir-1908


Accession
MI0015275
Description
Pongo pygmaeus ppy-mir-1908 precursor miRNA
Gene family
MIPF0001021; mir-1908


Sequence

gggaugccgCGGCGGGGAAGGCGAUUGGUCcggaugugugguaccaccggccgccggcuccgccccggcccccgcccc
(((..((((.(((((((..((((.((((((((......)))....))))).))))..))))))).)))).))).....

Structure
-----   au    C       AA    A     ----   ga 
     ggg  gccg GGCGGGG  GGCG UUGGU    Ccg  u
     |||  |||| |||||||  |||| |||||    |||   
     ccc  cggc ccgccuc  ccgc ggcca    ggu  g
ccccg   -c    c       gg    c     ccau   gu 


Annotation confidence Not enough data
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Genome context
chr11: 14526798-14526875 [+]

Database links

Mature ppy-miR-1908

Accession MIMAT0016237
Description Pongo pygmaeus ppy-miR-1908 mature miRNA
Sequence 10 - CGGCGGGGAAGGCGAUUGGUC - 30
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64