Stem-loop ppy-mir-1307

Accession

MI0015265

Description

Pongo pygmaeus ppy-mir-1307 precursor miRNA

Gene family

MIPF0000558; mir-1307

Sequence

caucaagacccagcugagucacugucacugccuaccaaucucgaccggaccucgaccggcucgucuguguugccaaucgACUCGGCGUGGCGUCGGUCGUGguagauaggcggucaugcauacgaauuuucagcucuuguucuggugac
(((((.(((..(((((((((..(((.((((((((.(.(((.(((((((.((.((.((((.(((..((......))..))).)))))).))..))))))).))).).))))))))...)))...))...)))))))...))).)))))..

Structure

--     a   -cc       ---  -ac   --c        c a   u       -a  u  a    c   uc  ug 
  cauca gac   agcugag   uc   ugu   acugccua c auc cgaccgg  cc cg ccgg ucg  ug  u
  ||||| |||   |||||||   ||   |||   |||||||| | ||| |||||||  || || |||| |||  ||   
  guggu uug   ucgacuu   ag   acg   uggcggau g ugG GCUGGCU  GG GC GGCU Agc  ac  u
ca     c   uuc       uua  cau   uac        a a   U       GC  U  -    C   ua  cg 

Annotation confidence Not enough data

Genome context

chr10: 102480353-102480501 [-]

Mature ppy-miR-1307

• Accession: MIMAT0016227
• Description: Pongo pygmaeus ppy-miR-1307 mature miRNA
• Sequence: 80 - ACUCGGCGUGGCGUCGGUCGUG - 101
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64