miRBase entry: ppy-mir-1256

Stem-loop ppy-mir-1256


Accession
MI0015216
Description
Pongo pygmaeus ppy-mir-1256 precursor miRNA
Gene family
MIPF0000594; mir-1256


Sequence

agucagccuguugaagcuuugaagcuuugaugccAGGCAUUGACUUCUCACUAGCUaugaaaguccuagcuagagagaagucaauguaugacaucuuguuucaauagauggcuguuuca
(((((..((((((((((...........((((.((.(((((((((((((.(((((((.((...)).))))))).))))))))))))).)).))))..)))))))))).)))))......

Structure
------     gc          uuugaagcuuu    c  G             A       u  a 
      aguca  cuguugaagc           gaug cA GCAUUGACUUCUC CUAGCUa ga  
      |||||  ||||||||||           |||| || ||||||||||||| ||||||| || a
      ucggu  gauaacuuug           cuac gu uguaacugaagag gaucgau cu  
acuuug     -a          ---------uu    a  a             a       c  g 


Annotation confidence Not enough data
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Genome context
chr1: 209363033-209363151 [+]

Database links

Mature ppy-miR-1256

Accession MIMAT0016182
Description Pongo pygmaeus ppy-miR-1256 mature miRNA
Sequence 35 - AGGCAUUGACUUCUCACUAGCU - 56
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64