miRBase entry: ppy-mir-1237

Stem-loop ppy-mir-1237


Accession
MI0015200
Description
Pongo pygmaeus ppy-mir-1237 precursor miRNA
Gene family
MIPF0000585; mir-1237


Sequence

gugggggggcccaggcgcgggaagggguggggguggcagagcgcugucccgggggcagggcugaagcgcggcgacaguaacUCUUUCUGCUCCGUCCCCCAG
...(((((((...((.((((((((((...(..((.((..(((.((((((...)))))).))).....)).))..).....)))))))))).)))))))))..

Structure
gug       cca  c          --gug gg  g  ---ag   g      c 
   ggggggc   gg gcgggaaggg     g  gu gc     agc cugucc  
   |||||||   || ||||||||||     |  || ||     ||| |||||| g
   CCCCCUG   CC CGUCUUUCUc     c  cg cg     ucg gacggg  
-GA       ---  U          aauga ag  g  cgaag   g      g 


Annotation confidence Not enough data
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Genome context
chr11: 11602113-11602214 [-]

Database links

Mature ppy-miR-1237

Accession MIMAT0016167
Description Pongo pygmaeus ppy-miR-1237 mature miRNA
Sequence 82 - UCUUUCUGCUCCGUCCCCCAG - 102
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64