Stem-loop ppy-mir-1228

Accession

MI0015197

Description

Pongo pygmaeus ppy-mir-1228 precursor miRNA

Gene family

MIPF0000924; mir-1228

Sequence

gugggcaggggcagguauguggugggugguggccugaggugagcagggcccUCACACCUGCCUCACCCCCCag
(.(((..(((((((((..((((.(((((.(.(((...))).).)...)))))))))))))))))..))).)..

Structure

-- u   ca         au    u    --- g g   u 
  g ggg  ggggcaggu  gugg gggu   g u gcc  
  | |||  |||||||||  |||| ||||   | | ||| g
  C CCC  CUCCGUCCA  CACU cccg   c a ugg  
ga C   CA         --    -    gga g g   a 

Annotation confidence Not enough data

Genome context

chr12: 57007167-57007239 [+]

Mature ppy-miR-1228

• Accession: MIMAT0016164
• Description: Pongo pygmaeus ppy-miR-1228 mature miRNA
• Sequence: 52 - UCACACCUGCCUCACCCCCC - 71
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64