miRBase entry: ppy-mir-939

Stem-loop ppy-mir-939


Accession
MI0015174
Description
Pongo pygmaeus ppy-mir-939 precursor miRNA
Gene family
MIPF0000490; mir-939


Sequence

uguggcagggucUGGGGAGCUGAGGCUCUGGGAGUGgccggagcugacucugggccucugcuccccagugucugaccgcg
.((((((((..(((((((((.(((((((..((((((((....))).)))))))))))).)))))))))..)))).)))).

Structure
u    -    gu         U       UG     -   c 
 gugg cagg  cUGGGGAGC GAGGCUC  GGAGU Ggc g
 |||| ||||  ||||||||| |||||||  ||||| |||  
 cgcc gucu  gaccccucg cuccggg  ucuca ucg g
g    a    gu         u       --     g   a 


Annotation confidence Not enough data
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Genome context
chr8: 152754611-152754690 [-]

Database links

Mature ppy-miR-939

Accession MIMAT0016139
Description Pongo pygmaeus ppy-miR-939 mature miRNA
Sequence 13 - UGGGGAGCUGAGGCUCUGGGAGUG - 36
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64