Stem-loop ppy-mir-889

Accession

MI0015159

Description

Pongo pygmaeus ppy-mir-889 precursor miRNA

Gene family

MIPF0000514; mir-889

Sequence

gugcuuaaagaauggcuguccguaguauggucucuauauuuaugaugaUUAAUAUCGGACAACCAUUGUuuuaguaucc
(((((.(((.(((((.((((((..((.(((((((.........)).)))))))..)))))).))))).))).)))))..

Structure

--     u   g     c      ua  a     -  uau 
  gugcu aaa aaugg uguccg  gu ugguc uc   a
  ||||| ||| ||||| ||||||  || ||||| ||   u
  uauga uuU UUACC ACAGGC  UA AUUag ag   u
cc     u   G     A      UA  -     u  uau 

Annotation confidence Not enough data

Genome context

chr14: 102610033-102610111 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from ppy-mir-889

Mature ppy-miR-889

• Accession: MIMAT0016124
• Description: Pongo pygmaeus ppy-miR-889 mature miRNA
• Sequence: 49 - UUAAUAUCGGACAACCAUUGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64