miRBase entry: ppy-mir-873

Stem-loop ppy-mir-873


Accession
MI0015150
Description
Pongo pygmaeus ppy-mir-873 precursor miRNA
Gene family
MIPF0000390; mir-873


Sequence

gugugcauuuGCAGGAACUUGUGAGUCUCCUauugaaaaugaacaggagacugaugaguucccgggaacacccacaa
(((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).)))..

Structure
--   u ca   G A         G        a  ga 
  gug g  uuu C GGAACUUGU AGUCUCCU uu  a
  ||| |  ||| | ||||||||| |||||||| ||  a
  cac c  aag g ccuugagua ucagagga aa  a
aa   c ac   g c         g        c  gu 


Annotation confidence Not enough data
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Genome context
chr9: 32808487-32808563 [+]

Database links

Mature ppy-miR-873

Accession MIMAT0016111
Description Pongo pygmaeus ppy-miR-873 mature miRNA
Sequence 11 - GCAGGAACUUGUGAGUCUCCU - 31
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64