Stem-loop ppy-mir-758

Accession

MI0015143

Description

Pongo pygmaeus ppy-mir-758 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

gccuggauacaugagaugguugaccagagagcacacgcuuuauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaaugc
...(((((((.((((.((((.((((((.(.(((.((((.........).))).)))..))))))).))))...)))))))))))....

Structure

-gcc       a    --a    u      a -a   c   - uuu 
    uggauac ugag   uggu gaccag g  gca acg c   a
    ||||||| ||||   |||| |||||| |  ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC C  UGU Ugc g   u
cgua       -    CCA    C      - AG   U   c ugu 

Annotation confidence Not enough data

Genome context

chr14: 102587434-102587521 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ppy-mir-758

Mature ppy-miR-758

• Accession: MIMAT0016103
• Description: Pongo pygmaeus ppy-miR-758 mature miRNA
• Sequence: 52 - UUUGUGACCUGGUCCACUAACC - 73
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64