miRBase entry: ppy-mir-668

Stem-loop ppy-mir-668

Accession

MI0015136

Description

Pongo pygmaeus ppy-mir-668 precursor miRNA

Gene family

MIPF0000357; mir-668

Sequence

gguaagugcgccucgggugagcaugcacuuaaugugagguguaUGUCACUCGGCUCGGCCCACUACc
((((.(((.(((((((((((.(((((((((......)))))))))))))))))...))).)))))))

Structure

    a   c   ---        g         aa 
ggua gug gcc   ucggguga caugcacuu  u
|||| ||| |||   |||||||| |||||||||   
cCAU CAC CGG   GGCUCACU GUaugugga  g
    -   C   CUC        -         gu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 102617958-102618024 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ppy-mir-668

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-668

Accession	MIMAT0016095
Description	Pongo pygmaeus ppy-miR-668 mature miRNA
Sequence	44 - UGUCACUCGGCUCGGCCCACUAC - 66
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64