miRBase entry: ppy-mir-658

Stem-loop ppy-mir-658


Accession
MI0015132
Description
Pongo pygmaeus ppy-mir-658 precursor miRNA
Gene family
MIPF0000643; mir-658


Sequence

gcucgguugccgugguugcaggcccggcccgcccgccagcucgcugacagcgcgacucagGGCGGAGGGAAGUAGGUCCGUUGGUcgguugggaacgagg
.((((...((((.....((.(((((..(((..(((((((.((((.......))))))...))))).)))..)..)))).))....))))......)))).

Structure
g    ---guu    ugguu  a    -- gg   gc     ---  c    ug 
 cucg      gccg     gc ggcc  c  ccc  ccgcc   ag ucgc  a
 ||||      ||||     || ||||  |  |||  |||||   || ||||  c
 gagc      uggc     UG CUGG  G  GGG  GGCGG   uc agcg  a
g    aagggu    -UGGU  C    AU AA   -A     gac  -    cg 


Annotation confidence Not enough data
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Genome context
chr22: 33016589-33016688 [-]

Database links

Mature ppy-miR-658

Accession MIMAT0016091
Description Pongo pygmaeus ppy-miR-658 mature miRNA
Sequence 61 - GGCGGAGGGAAGUAGGUCCGUUGGU - 85
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64