Stem-loop ppy-mir-650

Accession

MI0015125

Description

Pongo pygmaeus ppy-mir-650 precursor miRNA

Gene family

MIPF0000457; mir-650

Sequence

cagugcuggggucucAGGAGGCAGCUCUCUCGGGACgucuccaccauggccuggucucugcuccuccucacccuccucacucagggcacagguga
..((((((((((...((((((.(((....(((((.(((.......))).))))).....))))))))).)))))..........)))))......

Structure

----ca     ----------     cuc      C   -UCUC     A   cu 
      gugcu          ggggu   AGGAGG AGC     UCGGG Cgu  c
      |||||          |||||   |||||| |||     ||||| |||  c
      cacgg          uccca   uccucc ucg     ggucc gua  a
agugga     gacucacucc     --c      -   ucucu     g   cc 

Annotation confidence Not enough data

Genome context

chr22: 17582330-17582424 [+]

Mature ppy-miR-650

• Accession: MIMAT0016083
• Description: Pongo pygmaeus ppy-miR-650 mature miRNA
• Sequence: 16 - AGGAGGCAGCUCUCUCGGGAC - 36
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64