Stem-loop ppy-mir-645

Accession

MI0015121

Description

Pongo pygmaeus ppy-mir-645 precursor miRNA

Gene family

MIPF0000657; mir-645

Sequence

caguuccuaacaggccucaggccaguaccggucuguggccuggggguugaggaccccugcUCUAGGCUGGUACUGCUGAugcuuuaaaagagag
....((((...((((.((((..(((((((((((((.(((..(((((((...)))))))))).))))))))))))))))).))))....)).)).

Structure

cagu  -  -aac    c    gc             u   cu       g 
    uc cu    aggc ucag  caguaccggucug ggc  ggggguu  
    || ||    |||| ||||  ||||||||||||| |||  ||||||| a
    ag ga    uucg AGUC  GUCAUGGUCGGAU Ucg  uccccag  
---g  a  aaau    u    --             C   --       g 

Annotation confidence Not enough data

Genome context

chr20: 48339101-48339194 [+]

Mature ppy-miR-645

• Accession: MIMAT0016079
• Description: Pongo pygmaeus ppy-miR-645 mature miRNA
• Sequence: 61 - UCUAGGCUGGUACUGCUGA - 79
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64