Stem-loop ppy-mir-615

Accession

MI0015100

Description

Pongo pygmaeus ppy-mir-615 precursor miRNA

Gene family

MIPF0000342; mir-615

Sequence

cucgggaggggcgggaGGGGGUUCCCCGGUGCUCGGAUCucgagggugcuuauuguucggUCCGAGCCUGGGUCUCCGUCUUccccccaacccccc
...(((.((((.((((((.((...(((((.((((((((..((((.(.......).)))))))))))))))))...)).))))))))))...)))..

Structure

cuc   --a    c      G  UUC     U        Cu    g ug 
   ggg   gggg gggaGG GG   CCCGG GCUCGGAU  cgag g  c
   |||   |||| |||||| ||   ||||| ||||||||  |||| |  u
   ccc   cccc ccUUCU CC   GGGUC CGAGCCUg  gcuu u  u
-cc   caa    -      G  UCU     -        --    g ua 

Annotation confidence Not enough data

Genome context

chr12: 53810378-53810473 [+]

Mature ppy-miR-615-5p

• Accession: MIMAT0016056
• Description: Pongo pygmaeus ppy-miR-615-5p mature miRNA
• Sequence: 17 - GGGGGUUCCCCGGUGCUCGGAUC - 39
• Evidence: not_experimental

Mature ppy-miR-615-3p

• Accession: MIMAT0016057
• Description: Pongo pygmaeus ppy-miR-615-3p mature miRNA
• Sequence: 61 - UCCGAGCCUGGGUCUCCGUCUU - 82
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64