Stem-loop ppy-mir-590

Accession

MI0015077

Description

Pongo pygmaeus ppy-mir-590 precursor miRNA

Gene family

MIPF0000418; mir-590

Sequence

uagccagucagaaauGAGCUUAUUCAUAAAAGUGCAGuaugguggagucaaucugUAAUUUUAUGUAUAAGCUAGUcucugauugaaacgugcagca
....((((((((.((.(((((((.(((((((.(((((..(((.....)))..))))).))))))).))))))).)).))))))))............

Structure

--------uagc        a  G       U       G     ua   u 
            cagucaga au AGCUUAU CAUAAAA UGCAG  ugg g
            |||||||| || ||||||| ||||||| |||||  ||| g
            guuagucu UG UCGAAUA GUAUUUU AUguc  acu a
acgacgugcaaa        c  A       U       A     ua   g 

Annotation confidence Not enough data

Genome context

chr7: 13843173-13843269 [-]

Mature ppy-miR-590-5p

• Accession: MIMAT0016032
• Description: Pongo pygmaeus ppy-miR-590-5p mature miRNA
• Sequence: 16 - GAGCUUAUUCAUAAAAGUGCAG - 37
• Evidence: not_experimental

Mature ppy-miR-590-3p

• Accession: MIMAT0016033
• Description: Pongo pygmaeus ppy-miR-590-3p mature miRNA
• Sequence: 56 - UAAUUUUAUGUAUAAGCUAGU - 76
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64