miRBase entry: ppy-mir-589

Stem-loop ppy-mir-589


Accession
MI0015076
Description
Pongo pygmaeus ppy-mir-589 precursor miRNA
Gene family
MIPF0000496; mir-589


Sequence

uccagccugugcucaucggccccUGAGAACCACGUCUGCUCUGAGcuggguacugccuguucagaacaaacgcugguucccagacgcugccagcuggcc
.(((((.((.((.....(((..(((.(((((((((.((.(((((((.((......)).))))))).)).))).)))))).)))..))))))))))))..

Structure
-u     c  u  ucauc   cc   A      -   C  C       u  gu 
  ccagc ug gc     ggc  cUG GAACCA CGU UG UCUGAGc gg  a
  ||||| || ||     |||  ||| |||||| ||| || ||||||| ||   
  ggucg ac cg     ucg  gac cuuggu gca ac agacuug cc  c
cc     -  -  -----   ca   c      c   a  a       u  gu 


Annotation confidence Not enough data
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Genome context
chr7: 5522331-5522429 [-]

Database links

Mature ppy-miR-589

Accession MIMAT0016031
Description Pongo pygmaeus ppy-miR-589 mature miRNA
Sequence 24 - UGAGAACCACGUCUGCUCUGAG - 45
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64