Stem-loop ppy-mir-588

Accession

MI0015075

Description

Pongo pygmaeus ppy-mir-588 precursor miRNA

Gene family

MIPF0000681; mir-588

Sequence

agcuuagguaccaauUUGGCCACAAUGGGUUAGAACacuauuccacuguguucuuacccaccauggccaauauugggccuaag
..(((((((.((((((((((((...(((((.(((((((.........))))))).)))))...))))))).))))))))))))

Structure

ag       a     -       CAA     U       uau 
  cuuaggu ccaau UUGGCCA   UGGGU AGAACac   u
  ||||||| ||||| |||||||   ||||| |||||||   c
  gaauccg gguua aaccggu   accca ucuugug   c
--       -     u       acc     u       uca 

Annotation confidence Not enough data

Genome context

chr6: 129006178-129006260 [+]

Mature ppy-miR-588

• Accession: MIMAT0016030
• Description: Pongo pygmaeus ppy-miR-588 mature miRNA
• Sequence: 16 - UUGGCCACAAUGGGUUAGAAC - 36
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64