Stem-loop ppy-mir-578

Accession

MI0015066

Description

Pongo pygmaeus ppy-mir-578 precursor miRNA

Gene family

MIPF0000477; mir-578

Sequence

gauaaaucuauagacaaaauacaaucccagacaacaagaagcuccuauagcuccuguagCUUCUUGUGCUCUAGGAUUGUauuuuguuuauauau
........(((((((((((((((((((.(((..((((((((((...((((...))))))))))))))..))).)))))))))))))))))))...

Structure

gauaaauc                   c   ca          ccu    c 
        uauagacaaaauacaaucc aga  acaagaagcu   auag  
        ||||||||||||||||||| |||  ||||||||||   |||| u
        auauuuguuuuaUGUUAGG UCU  UGUUCUUCga   uguc  
-----uau                   A   CG          ---    c 

Annotation confidence Not enough data

Genome context

chr4: 171889219-171889313 [+]

Mature ppy-miR-578

• Accession: MIMAT0016020
• Description: Pongo pygmaeus ppy-miR-578 mature miRNA
• Sequence: 60 - CUUCUUGUGCUCUAGGAUUGU - 80
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64