Stem-loop ppy-mir-558

Accession

MI0015052

Description

Pongo pygmaeus ppy-mir-558 precursor miRNA

Gene family

MIPF0000538; mir-558

Sequence

gugugugugugugugugugguuauuuugguauaguagcucuaggcucuauuauaguuuccUGAGCUGCUGUACCAAAAUaccacaaacaggcug
........((.(((.((((((.((((((((((((((((((.(((..(((...)))...))))))))))))))))))))))))))).))).))..

Structure

gugugugu  g   g      u                  u   -cu   u 
        gu ugu uguggu auuuugguauaguagcuc agg   cua  
        || ||| |||||| |||||||||||||||||| |||   ||| u
        cg aca acacca UAAAACCAUGUCGUCGAG Ucc   gau  
------gu  g   a      -                  -   uuu   a 

Annotation confidence Not enough data

Genome context

chr2A: 79480806-79480899 [-]

Mature ppy-miR-558

• Accession: MIMAT0016005
• Description: Pongo pygmaeus ppy-miR-558 mature miRNA
• Sequence: 61 - UGAGCUGCUGUACCAAAAU - 79
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64