Stem-loop ppy-mir-555

Accession

MI0015049

Description

Pongo pygmaeus ppy-mir-555 precursor miRNA

Gene family

MIPF0000583; mir-555

Sequence

ggagugaacucagauguggagcacuaccuuugugagcagugugacccaaggccuguggacAGGGUAAGCUGCACCUCUGAUaaaacucugaucuau
(((((....(((((.(((.(((..((((((.((..((((.((........))))))..)))))))).))).))).)))))....))))).......

Structure

-------     gaac     u   g   ac      u  ga    u  gac 
       ggagu    ucaga gug agc  uaccuu gu  gcag gu   c
       |||||    ||||| ||| |||  |||||| ||  |||| ||    
       ucuca    AGUCU CAC UCG  AUGGGA ca  uguc cg   c
uaucuag     aaaU     C   G   -A      -  gg    -  gaa 

Annotation confidence Not enough data

Genome context

chr1: 96177027-96177122 [+]

Mature ppy-miR-555

• Accession: MIMAT0016001
• Description: Pongo pygmaeus ppy-miR-555 mature miRNA
• Sequence: 61 - AGGGUAAGCUGCACCUCUGAU - 81
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64