Stem-loop ppy-mir-554

Accession

MI0015048

Description

Pongo pygmaeus ppy-mir-554 precursor miRNA

Gene family

MIPF0000551; mir-554

Sequence

accugaguaaccuuuGCUAGUCCUACUCAGCCGGUacuggucuuagacugaugaugggucaggguucauauuuuggcaucucucccugggcaucu
.((((((.......(((((((((((((((..((((.(((....)))))))....))))).))))........))))))...)))...))).....

Structure

----a   ---   uaaccuu      --------    -     --GC    a   g 
     ccu   gag       uGCUAG        UCCU ACUCA    CGGU cug u
     |||   |||       ||||||        |||| |||||    |||| |||  
     ggg   cuc       acgguu        ggga ugggu    guca gau c
ucuac   ucc   ----ucu      uuauacuu    c     agua    -   u 

Annotation confidence Not enough data

Genome context

chr1: 100039478-100039572 [-]

Mature ppy-miR-554

• Accession: MIMAT0016000
• Description: Pongo pygmaeus ppy-miR-554 mature miRNA
• Sequence: 16 - GCUAGUCCUACUCAGCCGGU - 35
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64