Stem-loop ppy-mir-544

Accession

MI0015042

Description

Pongo pygmaeus ppy-mir-544 precursor miRNA

Gene family

MIPF0000436; mir-544

Sequence

auuuucaucaccuagggaucuuguuaaaaagcagauucugauucagggaccaagAUUCUGCAUUUUUAGCAAGUUCucaagugaugcuaau
.....((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..)))))).....

Structure

auuuu      cua    u           -     u   gauuc 
     caucac   ggga cuuguuaaaaa gcaga ucu     a
     ||||||   |||| ||||||||||| ||||| |||     g
     guagug   cuCU GAACGAUUUUU CGUCU Aga     g
uaauc      -aa    U           A     U   accag 

Annotation confidence Not enough data

Genome context

chr14: 102610806-102610896 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from ppy-mir-544

Mature ppy-miR-544

• Accession: MIMAT0015994
• Description: Pongo pygmaeus ppy-miR-544 mature miRNA
• Sequence: 55 - AUUCUGCAUUUUUAGCAAGUUC - 76
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64