miRBase entry: ppy-mir-525

Stem-loop ppy-mir-525

Accession

MI0015032

Description

Pongo pygmaeus ppy-mir-525 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

cucaggcugugacuCUCCAGAGGGAUGCACUUUCUcuuaugugaaaaaaaaaGAAGGCGCAUCCCUUUAGAGCGuuacgguuuggg
(((((((((((((.(((.((((((((((.((((((................)))))).)))))))))).))).)))))))))))))

Structure

             u   C          A      cuuaugu 
cucaggcugugac CUC AGAGGGAUGC CUUUCU       g
||||||||||||| ||| |||||||||| ||||||        
ggguuuggcauuG GAG UUUCCCUACG GGAAGa       a
             C   A          C      aaaaaaa

Annotation confidence Not enough data

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Genome context

chr19: 55473271-55473356 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ppy-mir-525

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-525-5p

Accession	MIMAT0015982
Description	Pongo pygmaeus ppy-miR-525-5p mature miRNA
Sequence	15 - CUCCAGAGGGAUGCACUUUCU - 35
Evidence	not_experimental

Mature ppy-miR-525-3p

Accession	MIMAT0015983
Description	Pongo pygmaeus ppy-miR-525-3p mature miRNA
Sequence	53 - GAAGGCGCAUCCCUUUAGAGCG - 74
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64