miRBase entry: ppy-mir-523

Stem-loop ppy-mir-523

Accession

MI0015030

Description

Pongo pygmaeus ppy-mir-523 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

ucucgugcugugacccucuagagggaagcacuuucugucgucugaaagaaaaGAACGCGCUUCCCUAUGGAGGGUuacccuuugaga
(((((....(((((((((((.((((((((.(.((((.((........))..)))).).)))))))).)))))))))))....)))))

Structure

     ugcu           g        a u    -g  guc 
ucucg    gugacccucua agggaagc c uucu  uc   u
|||||    ||||||||||| |||||||| | ||||  ||    
agagu    cauUGGGAGGU UCCCUUCG G AAGa  ag   g
     uucc           A        C C    aa  aaa

Annotation confidence Not enough data

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Genome context

chr19: 55474120-55474206 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from ppy-mir-523

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-523

Accession	MIMAT0015979
Description	Pongo pygmaeus ppy-miR-523 mature miRNA
Sequence	53 - GAACGCGCUUCCCUAUGGAGGGU - 75
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64