Stem-loop ppy-mir-520g

Accession

MI0015025

Description

Pongo pygmaeus ppy-mir-520g precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

ucccacgcugugacccucuagaggaagcacuuucuguuuguugucggagagaaaACAAAGUGCUUCCCUUUAGAGUGUuaccguuuggga
(((((.((.(((((.((((((((((((((((((((.((((....)))).))).....)))))))).))))))))).))))).)).)))))

Structure

     c  u     c         -        -----   g    u 
uccca gc gugac cucuagagg aagcacuu     ucu uuug u
||||| || ||||| ||||||||| ||||||||     ||| ||||  
agggu ug cauUG GAGAUUUCC UUCGUGAA     aga aggc g
     u  c     U         C        ACAaa   g    u 

Annotation confidence Not enough data

Genome context

chr19: 55494046-55494135 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ppy-mir-520g

Mature ppy-miR-520g

• Accession: MIMAT0015975
• Description: Pongo pygmaeus ppy-miR-520g mature miRNA
• Sequence: 55 - ACAAAGUGCUUCCCUUUAGAGUGU - 78
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64