miRBase entry: ppy-mir-520b

Stem-loop ppy-mir-520b


Accession
MI0015020
Description
Pongo pygmaeus ppy-mir-520b precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

cccucuacagggaagcacuuucuguugucugaaagaaaagAAAGUGCUUCCUUGUAGAGGG
(((((((((((((((((((((((....(((...)))..)))))))))))))))))))))))

Structure
                       guug   g 
cccucuacagggaagcacuuucu    ucu  
|||||||||||||||||||||||    ||| a
GGGAGAUGUUCCUUCGUGAAAga    aga  
                       --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 55476981-55477041 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from ppy-mir-520b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-520b

Accession MIMAT0015968
Description Pongo pygmaeus ppy-miR-520b mature miRNA
Sequence 41 - AAAGUGCUUCCUUGUAGAGGG - 61
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64