miRBase entry: ppy-mir-519e

Stem-loop ppy-mir-519e


Accession
MI0015018
Description
Pongo pygmaeus ppy-mir-519e precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

ucucaugcagucauucuccaaaagggaguacuuucuguugucugaaagaaaacaAAGUGCCUCCUUUUAGAGUGUUacuguuugaga
(((((.(((((.((.(((.(((((((.((((((..((((.(((...))).)))))))))).))))))).))).)).))))).)))))

Structure
     u     c  u   c       a      uc    g   g 
ucuca gcagu au cuc aaaaggg guacuu  uguu ucu  
||||| ||||| || ||| ||||||| ||||||  |||| ||| a
agagu uguca UG GAG UUUUCCU CGUGAA  acaa aga  
     u     U  U   A       C      --    a   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 55454916-55455002 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ppy-mir-519e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-519e

Accession MIMAT0015965
Description Pongo pygmaeus ppy-miR-519e mature miRNA
Sequence 55 - AAGUGCCUCCUUUUAGAGUGUU - 76
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64