Stem-loop ppy-mir-516b-1

Accession

MI0015001

Description

Pongo pygmaeus ppy-mir-516b-1 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

ucucaggcugugaccAUCUGGAGGUAAGAAGCACUUUcuguuuugugaaagaaaagaaagugcuuccuuucagaggguuacucuuugaga
(((((((..((((((.((((((((...((((((((((((.((((.....)))).)))))))))))))))))))).))))))..)))))))

Structure

       cu      A        UAA            g    g 
ucucagg  gugacc UCUGGAGG   GAAGCACUUUcu uuuu u
|||||||  |||||| ||||||||   |||||||||||| |||| g
agaguuu  cauugg agacuuuc   cuucgugaaaga aaga a
       cu      g        ---            a    a 

Annotation confidence Not enough data

Genome context

chr19: 55511421-55511510 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ppy-mir-516b-1

Mature ppy-miR-516b

• Accession: MIMAT0015947
• Description: Pongo pygmaeus ppy-miR-516b mature miRNA
• Sequence: 16 - AUCUGGAGGUAAGAAGCACUUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64