miRBase entry: ppy-mir-515-2

Stem-loop ppy-mir-515-2


Accession
MI0014998
Description
Pongo pygmaeus ppy-mir-515-2 precursor miRNA
Gene family
MIPF0000020; mir-515

Literature search
1 open access papers mention ppy-mir-515-2
(2 sentences)

Sequence

ucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugaga
(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).)))))

Structure
     u     c  U           A    UU      gu 
ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
||||| ||||| || ||||||||||| ||||  ||||||  u
agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
     u     U  C           C    --      aa 


Annotation confidence Not enough data
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Genome context
NW_002965493.1: 1122-1204 [-]

Database links

Mature ppy-miR-515-5p

Accession MIMAT0015943
Description Pongo pygmaeus ppy-miR-515-5p mature miRNA
Sequence 14 - UUCUCCAAAAGAAAGCACUUUCUG - 37
Evidence not_experimental

Mature ppy-miR-515-3p

Accession MIMAT0015944
Description Pongo pygmaeus ppy-miR-515-3p mature miRNA
Sequence 51 - GAGUGCCUUCUUUUGGAGCGUU - 72
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64