miRBase entry: ppy-mir-512-1

Stem-loop ppy-mir-512-1


Accession
MI0014988
Description
Pongo pygmaeus ppy-mir-512-1 precursor miRNA
Gene family
MIPF0000518; mir-512


Sequence

ucucagucuguggcgcucagccuugggggcacuuucuggugccagaaugaAAGUGCUGUCAUAGCUGAGGUCcaaugacugagg
.(((((((..(((..((((((..(((.(((((((((............))))))))).)))..))))))..)))..))))))).

Structure
u       ug   cg      cu   g         uggug 
 cucaguc  ugg  cucagc  ugg ggcacuuuc     c
 |||||||  |||  ||||||  ||| |||||||||      
 gagucag  acC  GAGUCG  ACU UCGUGAAag     c
g       ua   UG      AU   G         uaaga 


Annotation confidence Not enough data
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Genome context
chr19: 55442498-55442581 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ppy-mir-512-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-512-3p

Accession MIMAT0015937
Description Pongo pygmaeus ppy-miR-512-3p mature miRNA
Sequence 51 - AAGUGCUGUCAUAGCUGAGGUC - 72
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64