miRBase entry: ppy-mir-510

Stem-loop ppy-mir-510

Accession

MI0014985

Description

Pongo pygmaeus ppy-mir-510 precursor miRNA

Gene family

MIPF0000130; mir-506

Sequence

gugguguccUACUCCGGAGAGUGGCAAUCACauguucaaucaagugugauugaaaccucuaagaguggaauaacac
(((..((.((((((.((((.((..(((((((((..........)))))))))..))))))..)))))).))..)))

Structure

   gu  c      -C    A  GG         guuc 
gug  gu cUACUC  GGAG GU  CAAUCACau    a
|||  || ||||||  |||| ||  |||||||||     
cac  ua ggugag  ucuc ca  guuagugug    a
   aa  a      aa    -  aa         aacu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 147155823-147155898 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-510

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-510

Accession	MIMAT0015935
Description	Pongo pygmaeus ppy-miR-510 mature miRNA
Sequence	10 - UACUCCGGAGAGUGGCAAUCAC - 31
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64