Stem-loop ppy-mir-497

Accession

MI0014970

Description

Pongo pygmaeus ppy-mir-497 precursor miRNA

Gene family

MIPF0000231; mir-497

Sequence

ccaccccgguccugcucccgcccCAGCAGCACACUGUGGUUUGUgcggcauuguggccacguccaaaccacacugugguguuagagcgagggugggggaggcaccgccgagg
...((.(((((((.((((((((((((((.((((.(((((((((((.(((......))).))..))))))))).)))).)))).....).))))))))))))....)))).))

Structure

cca  c    ----   g         - -----    G    C         --  c   au 
   cc cggu    ccu cucccgccc C     AGCA CACA UGUGGUUUG  Ug ggc  u
   || ||||    ||| ||||||||| |     |||| |||| |||||||||  || |||   
   gg gccg    gga ggggguggg g     uugu gugu acaccaaac  gc ccg  g
---  a    ccac   -         a cgaga    g    c         cu  a   gu 

Annotation confidence Not enough data

Genome context

chr17: 7022994-7023105 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-497

Mature ppy-miR-497

• Accession: MIMAT0015918
• Description: Pongo pygmaeus ppy-miR-497 mature miRNA
• Sequence: 24 - CAGCAGCACACUGUGGUUUGU - 44
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64