miRBase entry: ppy-mir-490

Stem-loop ppy-mir-490


Accession
MI0014963
Description
Pongo pygmaeus ppy-mir-490 precursor miRNA
Gene family
MIPF0000229; mir-490


Sequence

uggaggccuugcugguuuggaaaguucauuguucgacaCCAUGGAUCUCCAGGUGGGUcaaguuuagagaugcacCAACCUGGAGGACUCCAUGCUGuugagcuguucacgagcagcggacacuucca
((((((..((((((.(((((((........((((((((.(((((((((((((((.(((((..........)).))).)))))))))..)))))).))))))))..))).))))))))))...))))))

Structure
      -cc      g    -   aguucauu        C      --         G   -  aguu 
uggagg   uugcug uuug gaa        guucgaca CAUGGA  UCUCCAGGU GGU ca    u
||||||   |||||| |||| |||        |||||||| ||||||  ||||||||| ||| ||     
accuuc   ggcgac gagc cuu        cgaguuGU GUACCU  GGAGGUCCA Cca gu    a
      aca      -    a   ------gu        C      CA         A   c  agag 


Annotation confidence Not enough data
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Genome context
chr7: 134014984-134015111 [+]

Database links

Mature ppy-miR-490-5p

Accession MIMAT0015909
Description Pongo pygmaeus ppy-miR-490-5p mature miRNA
Sequence 39 - CCAUGGAUCUCCAGGUGGGU - 58
Evidence not_experimental

Mature ppy-miR-490-3p

Accession MIMAT0015910
Description Pongo pygmaeus ppy-miR-490-3p mature miRNA
Sequence 76 - CAACCUGGAGGACUCCAUGCUG - 97
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64