miRBase entry: ppy-mir-487b

Stem-loop ppy-mir-487b

Accession

MI0014960

Description

Pongo pygmaeus ppy-mir-487b precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uugguacuuggagagugguuaucccuguccuguucguuuugcucaugucgAAUCGUACAGGGUCAUCCACUUuuucaguaucaa
.(((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))))).

Structure

u       u         uuau      c u     uuuug 
 ugguacu ggagagugg    cccugu c guucg     c
 ||||||| |||||||||    |||||| | |||||      
 acuauga uuuUUCACC    GGGACA G UAAgc     u
a       c         UACU      U C     uguac

Annotation confidence Not enough data

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Genome context

chr14: 102608591-102608674 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from ppy-mir-487b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-487b

Accession	MIMAT0015906
Description	Pongo pygmaeus ppy-miR-487b mature miRNA
Sequence	51 - AAUCGUACAGGGUCAUCCACUU - 72
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64