miRBase entry: ppy-mir-450a-1

Stem-loop ppy-mir-450a-1


Accession
MI0014949
Description
Pongo pygmaeus ppy-mir-450a-1 precursor miRNA
Gene family
MIPF0000128; mir-450


Sequence

aaacgauacuaaacuguUUUUGCGAUGUGUUCCUAAUAugcacaauaaauauauugggaacauuuugcauguauaguuugguaucaauaua
....(((((((((((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))))))))))......

Structure
--aaac             UUU     U              cac 
      gauacuaaacugu   UGCGA GUGUUCCUAAUAug   a
      |||||||||||||   ||||| ||||||||||||||   a
      cuaugguuugaua   acguu uacaaggguuauau   u
auauaa             ugu     u              aaa 


Annotation confidence Not enough data
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Genome context
chrX: 133999582-133999672 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppy-mir-450a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-450a

Accession MIMAT0015893
Description Pongo pygmaeus ppy-miR-450a mature miRNA
Sequence 18 - UUUUGCGAUGUGUUCCUAAUA - 38
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64