miRBase entry: ppy-mir-449a

Stem-loop ppy-mir-449a


Accession
MI0014947
Description
Pongo pygmaeus ppy-mir-449a precursor miRNA
Gene family
MIPF0000133; mir-449


Sequence

cugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUugaauaugugaauggcaucggcuaacgugcaacugcugucuuauugcauauaca
.(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))..

Structure
-c             c       -    U          u aa   g 
  ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
  ||||||||||||| ||||||| |||| |||||||||| |  |||  
  auauacguuauuc gucguca cgug caaucggcua c  gua g
ac             u       a    -          - -g   a 


Annotation confidence Not enough data
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Genome context
chr5: 56431748-56431838 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-449a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-449a

Accession MIMAT0015891
Description Pongo pygmaeus ppy-miR-449a mature miRNA
Sequence 16 - UGGCAGUGUAUUGUUAGCUGGU - 37
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64