miRBase entry: ppy-mir-425

Stem-loop ppy-mir-425


Accession
MI0014941
Description
Pongo pygmaeus ppy-mir-425 precursor miRNA
Gene family
MIPF0000242; mir-425


Sequence

gaaagcgcuuuggAAUGACACGAUCACUCCCGUUGAgugggcacccgagaagccaucgggaaugucguguccgcccagugcucuuuc
(((((.((.((((...(((((((.((.(((((....((((............))))))))).)))))))))...)))).)).)))))

Structure
     c  u    AAU       U  C     UUGA    gcacc 
gaaag gc uugg   GACACGA CA UCCCG    gugg     c
||||| || ||||   ||||||| || |||||    ||||      
cuuuc cg gacc   cugugcu gu agggc    uacc     g
     u  u    cgc       -  a     ----    gaaga 


Annotation confidence Not enough data
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Genome context
chr3: 97473537-97473623 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-425
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-425

Accession MIMAT0015885
Description Pongo pygmaeus ppy-miR-425 mature miRNA
Sequence 14 - AAUGACACGAUCACUCCCGUUGA - 36
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64