miRBase entry: ppy-mir-411

Stem-loop ppy-mir-411

Accession

MI0014935

Description

Pongo pygmaeus ppy-mir-411 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

ugguacuuggagagaUAGUAGACCGUAUAGCGUACGcuuuaucugugacguauguaacacgguccacuaacccucaguaucaaauccauccccgag
(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))..............

Structure

--------------       ug   a a    A      AUA       - uuu 
              ugguacu  gag g UAGU GACCGU   GCGUACG c   a
              |||||||  ||| | |||| ||||||   ||||||| |   u
              acuauga  cuc c auca cuggca   uguaugc g   c
gagccccuaccuaa       --   c a    c      caa       a ugu

Annotation confidence Not enough data

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Genome context

chr14: 102584737-102584832 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ppy-mir-411

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-411

Accession	MIMAT0015878
Description	Pongo pygmaeus ppy-miR-411 mature miRNA
Sequence	16 - UAGUAGACCGUAUAGCGUACG - 36
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64