miRBase entry: ppy-mir-410

Stem-loop ppy-mir-410


Accession
MI0014934
Description
Pongo pygmaeus ppy-mir-410 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

gguaccugagaagagguugucugugaugaguucgcuuuuauuaaugacgAAUAUAACACAGAUGGCCUGUuuucaguacc
(((((.((((((.((((((((((((.((.((((((..........).))))).)).)))))))))))).)))))))))))

Structure
     c      g            a  a     - uuuu 
gguac ugagaa agguugucugug ug guucg c    a
||||| |||||| |||||||||||| || ||||| |     
ccaug acuuuU UCCGGUAGACAC AU UAAgc g    u
     -      G            A  A     a uaau 


Annotation confidence Not enough data
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Genome context
chr14: 102628634-102628713 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from ppy-mir-410
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-410

Accession MIMAT0015877
Description Pongo pygmaeus ppy-miR-410 mature miRNA
Sequence 50 - AAUAUAACACAGAUGGCCUGU - 70
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64