Stem-loop ppy-mir-381

Accession

MI0014929

Description

Pongo pygmaeus ppy-mir-381 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uacuuaaagcgagguugcccuuuguauauucgguuuauugacauggaaUAUACAAGGGCAAGCUCUCUGUgagua
((((((.((.(((.((((((((.((((((((.((........)).)))))))))))))))).))).)).))))))

Structure

      a  c   g        u        g  uua 
uacuua ag gag uugcccuu guauauuc gu   u
|||||| || ||| |||||||| |||||||| ||    
augagU UC CUC AACGGGAA CAUAUaag ua   u
      G  U   G        -        g  cag 

Annotation confidence Not enough data

Genome context

chr14: 102608058-102608132 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ppy-mir-381

Mature ppy-miR-381

• Accession: MIMAT0015871
• Description: Pongo pygmaeus ppy-miR-381 mature miRNA
• Sequence: 49 - UAUACAAGGGCAAGCUCUCUGU - 70
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64