miRBase entry: ppy-mir-376b

Stem-loop ppy-mir-376b


Accession
MI0014923
Description
Pongo pygmaeus ppy-mir-376b precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

caguccuucuuugguauuuaaaacguggauauuccuucuauguuuacgugauuccuggauaAUCAUAGAGGAAAAUCCAUGUUuucaguaucaaaugcug
((((.....(((((((((.(((((((((((.(((((.(((((.((((..........).))).)))))))))).))))))))))).))))))))).))))

Structure
    ccuuc         u           a     u     u   - guga 
cagu     uuugguauu aaaacguggau uuccu cuaug uua c    u
||||     ||||||||| ||||||||||| ||||| ||||| ||| |     
gucg     aaacuauga uuUUGUACCUA AAGGA GAUAC Aau g    u
    ----u         c           A     -     U   a gucc 


Annotation confidence Not enough data
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Genome context
chr14: 102602569-102602668 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from ppy-mir-376b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-376b

Accession MIMAT0015865
Description Pongo pygmaeus ppy-miR-376b mature miRNA
Sequence 62 - AUCAUAGAGGAAAAUCCAUGUU - 83
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64