miRBase entry: ppy-mir-376a-2

Stem-loop ppy-mir-376a-2


Accession
MI0014922
Description
Pongo pygmaeus ppy-mir-376a-2 precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

gguauuuaaaagguagauuuuccuucuaugguuacguguuugaugguuaAUCAUAGAGGAAAAUCCACGUuuucaguauc
((((((.((((.((.(((((((((.((((((((((((.....)))..)))))))))))))))))).)).)))).))))))

Structure
      u    g  a         u         --   g 
gguauu aaaa gu gauuuuccu cuaugguua  cgu u
|||||| |||| || ||||||||| |||||||||  ||| u
cuauga uuuU CA CUAAAAGGA GAUACUAau  gua u
      c    G  C         -         ug   g 


Annotation confidence Not enough data
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Genome context
chr14: 102602202-102602281 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from ppy-mir-376a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-376a

Accession MIMAT0015864
Description Pongo pygmaeus ppy-miR-376a mature miRNA
Sequence 50 - AUCAUAGAGGAAAAUCCACGU - 70
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64