miRBase entry: ppy-mir-372

Stem-loop ppy-mir-372


Accession
MI0014917
Description
Pongo pygmaeus ppy-mir-372 precursor miRNA
Gene family
MIPF0000068; mir-290


Sequence

gugggccucaaauguggagcacuauucugauguccaaguggAAAGUGCUGCGACAUUUGAGCGUcac
...((((((((((((.(((((((.((((..(.....)..)))))))))).).))))))))).)))..

Structure
gug   -         g -      a    ga g 
   ggc cucaaaugu g agcacu uucu  u u
   ||| ||||||||| | |||||| ||||  | c
   cUG GAGUUUACA C UCGUGA AAgg  a c
-ca   C         G G      -    ug a 


Annotation confidence Not enough data
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Genome context
chr19: 55571490-55571556 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppy-mir-372
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-372

Accession MIMAT0015860
Description Pongo pygmaeus ppy-miR-372 mature miRNA
Sequence 42 - AAAGUGCUGCGACAUUUGAGCGU - 64
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64