miRBase entry: ppy-mir-365-1

Stem-loop ppy-mir-365-1


Accession
MI0014911
Description
Pongo pygmaeus ppy-mir-365-1 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

accgcagggaaaaugagggacuuuugggggcagauguguuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).

Structure
acc      aa        ac           ----   -   uuu 
   gcaggg  aaugaggg  uuuugggggca    gau gug   c
   ||||||  ||||||||  |||||||||||    ||| |||   c
   cguucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
--a      cg        -A           AAUa   u   cuu 


Annotation confidence Not enough data
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Genome context
chr16: 14777053-14777139 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-365-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-365

Accession MIMAT0015853
Description Pongo pygmaeus ppy-miR-365 mature miRNA
Sequence 56 - UAAUGCCCCUAAAAAUCCUUAU - 77
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64