Stem-loop ppy-mir-330

Accession

MI0014898

Description

Pongo pygmaeus ppy-mir-330 precursor miRNA

Gene family

MIPF0000200; mir-330

Sequence

cuuuggcgaucacugccUCUCUGGGCCUGUGUCUUAGGCucugcaagaucaaccgaGCAAAGCACACGGCCUGCAGAGAggcagcgcucugccc
....(((((.(.(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))).).)).))).

Structure

cuuu   -  u a           --    -    U   AG    ugcaa 
    ggc ga c cugccUCUCUG  GGCC UGUG CUU  GCuc     g
    ||| || | |||||||||||  |||| |||| |||  ||||     a
    ccg cu g gacggAGAGAC  CCGG ACAC GAA  CGag     u
---c   u  c c           GU    C    -   -A    ccaac 

Annotation confidence Not enough data

Genome context

chr19: 46914859-46914952 [-]

Mature ppy-miR-330-5p

• Accession: MIMAT0015833
• Description: Pongo pygmaeus ppy-miR-330-5p mature miRNA
• Sequence: 18 - UCUCUGGGCCUGUGUCUUAGGC - 39
• Evidence: not_experimental

Mature ppy-miR-330-3p

• Accession: MIMAT0015834
• Description: Pongo pygmaeus ppy-miR-330-3p mature miRNA
• Sequence: 57 - GCAAAGCACACGGCCUGCAGAGA - 79
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64