miRBase entry: ppy-mir-302d

Stem-loop ppy-mir-302d


Accession
MI0014882
Description
Pongo pygmaeus ppy-mir-302d precursor miRNA
Gene family
MIPF0000071; mir-302


Sequence

ccucuacuuuaacauggaugcacuugcugugacaugacaaaaaUAAGUGCUUCCAUGUUUGAGUGUgg
((..(((((.((((((((.(((((((.(((......)))....))))))).)))))))).))))).))

Structure
  uc     u        u       ---c   ga 
cc  uacuu aacaugga gcacuug    ugu  c
||  ||||| |||||||| |||||||    |||   
gg  GUGAG UUGUACCU CGUGAAU    aca  a
  -U     U        U       aaaa   gu 


Annotation confidence Not enough data
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Genome context
chr4: 117393985-117394052 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from ppy-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-302d

Accession MIMAT0015819
Description Pongo pygmaeus ppy-miR-302d mature miRNA
Sequence 44 - UAAGUGCUUCCAUGUUUGAGUGU - 66
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64