miRBase entry: ppy-mir-302b

Stem-loop ppy-mir-302b


Accession
MI0014880
Description
Pongo pygmaeus ppy-mir-302b precursor miRNA
Gene family
MIPF0000071; mir-302


Sequence

gcucccuucaacuuuaacauggaagugcuuucugugacuuuaaaagaagUAAGUGCUUCCAUGUUUUAGUAGgagu
.....((((.(((..(((((((((((((((......(((((....))))))))))))))))))))..))).)))).

Structure
gcucc    a   uu               ucugug     a 
     cuuc acu  aacauggaagugcuu      acuuu a
     |||| |||  |||||||||||||||      |||||  
     gagG UGA  UUGUACCUUCGUGAA      Ugaag a
----u    A   UU               ------     a 


Annotation confidence Not enough data
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Genome context
chr4: 117394496-117394571 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from ppy-mir-302b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-302b

Accession MIMAT0015817
Description Pongo pygmaeus ppy-miR-302b mature miRNA
Sequence 50 - UAAGUGCUUCCAUGUUUUAGUAG - 72
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64