Stem-loop ppy-mir-300

Accession

MI0014878

Description

Pongo pygmaeus ppy-mir-300 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

ugcuacuugaagagagguaauccuucaugcauuugcuuuacuugcaaugauUAUACAAGGGCAGACUCUCUCUggggagcaaa
((((.((((.((((((....(((((....((((.((.......)))))).......)))))....)))))).)))).))))..

Structure

--    a    a      guaa     ---caug    u  uu 
  ugcu cuug agagag    uccuu       cauu gc  u
  |||| |||| ||||||    |||||       |||| ||  a
  acga gggU UCUCUC    GGGAA       guaa cg  c
aa    g    C      AGAC     CAUAUua    -  uu 

Annotation confidence Not enough data

Genome context

chr14: 102603492-102603574 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ppy-mir-300

Mature ppy-miR-300

• Accession: MIMAT0015815
• Description: Pongo pygmaeus ppy-miR-300 mature miRNA
• Sequence: 52 - UAUACAAGGGCAGACUCUCUCU - 73
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64