miRBase entry: ppy-mir-183

Stem-loop ppy-mir-183


Accession
MI0014848
Description
Pongo pygmaeus ppy-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183


Sequence

cagagcgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUgugaacagucucagucagugaauuaccgaagggccauaaacagagcagagacagauccacga
.....((((..(((((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))).....))..)))).

Structure
cagag    ac  -----         g      A  --    GA        --   ac 
     cgug  uc     cuguucugu UAUGGC CU  GGUA  AUUCACUg  uga  a
     ||||  ||     ||||||||| |||||| ||  ||||  ||||||||  |||   
     gcac  ag     gacgagaca auaccg ga  ccau  uaagugac  acu  g
----a    cu  acaga         a      g  ag    --        ug   cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 126690908-126691014 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppy-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-183

Accession MIMAT0015780
Description Pongo pygmaeus ppy-miR-183 mature miRNA
Sequence 24 - UAUGGCACUGGUAGAAUUCACU - 45
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64