miRBase entry: ppy-mir-181c

Stem-loop ppy-mir-181c


Accession
MI0014846
Description
Pongo pygmaeus ppy-mir-181c precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

cggaaaauuugccaaggguuugggggAACAUUCAACCUGUCGGUGAGUuugggcagcucaggcaaaccaucgaccguugaguggacccugagaccuggaauugccauccu
.(((.......(((..(((((.((((..((((((((..(((((((.(((((...........)))))))))))).))))))))..)))).))))))))........))).

Structure
c   -aaauuug   ag     g    AA        CU       A     ggca 
 gga        cca  gguuu gggg  CAUUCAAC  GUCGGUG GUuug    g
 |||        |||  ||||| ||||  ||||||||  ||||||| |||||    c
 ccu        ggu  ccaga uccc  gugaguug  cagcuac caaac    u
u   accguuaa   --     g    ag        -c       -     ggac 


Annotation confidence Not enough data
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Genome context
chr19: 13988167-13988276 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-181c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-181c

Accession MIMAT0015778
Description Pongo pygmaeus ppy-miR-181c mature miRNA
Sequence 27 - AACAUUCAACCUGUCGGUGAGU - 48
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64